Exercise 2

Exercise 2:  Sequence formats and conversion

Go to www.ncbi.nlm.nih.gov.  Find the gene with accession 

number U89872 Look at the format of the GenBank file. 

Display it in FASTA format. Note the difference of the format file1. Save this file to your hard drive2. Download the GenBank files X03921 and X74797 to your hard drive

Use "ReadSeq" to convert them to various formats, and look at the output files using the "more" command

Use the Emboss module "seqret" to convert to some other formats and look at the output files. You may view the instructions with the command "tfm seqret"Or
Sequence Modification suitehttp://bioinformatics.org/sms/


Seqret : Read and Reformat biosequences. Launch EMBOSS Seqret



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